scALABLE-viewer

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2. QC and alignment

Min genes Min counts

Min cells Mito %

Minimum cosine similarity score Ambient RNA correction

QC cell counts will appear here while the analysis runs.

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Visualization Panel 1

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Annotation 1 Values

Annotation 2 Values

Visualization Panel 2

Select plot type Select molecule

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Annotation 1 Values

Annotation 2 Values

Differential gene analyses between biological groups (i.e., disease versus controls) are only enabled when two or more samples (multiple h5 files or a single h5ad) are uploaded for the job.

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Ask a research question, or generate a biological summary of the saved results across cell states and modalities. Summary interpretations and testable hypotheses link to supporting results; numerical evidence is read directly from this dataset.

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scALABLE-viewer

1. Upload

2. QC and alignment

QC filter progress

Reference Preview

3. Results

Visualization Panel 1

Visualization Panel 2

DIFFERENTIAL ANALYSIS

Differential Explorer

Gene Detail

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